Pyhealth.readthedocs.io

Welcome to PyHealth!

WEBIntroduction #. PyHealth can support diverse electronic health records (EHRs) such as MIMIC and eICU and all OMOP-CDM based databases and provide various advanced …

Actived: 2 days ago

URL: https://pyhealth.readthedocs.io/en/latest/index.html

pyhealth.datasets.shhs

WEBIn all, 6,441 men and women aged 40 years and older were enrolled between November 1, 1995 and January 31, 1998 to take part in SHHS Visit 1. During exam cycle 3 (January …

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pyhealth.data.Patient

WEBA Patient is a collection of Visit for the current patients. It contains all necessary attributes of a patient, such as ethnicity, mortality status, gender, etc. It can support various …

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Advanced Tutorials

WEBWe provided advanced tutorials for supporting various needs. Advanced Tutorial 1: Fit your dataset into our pipeline [Video] Advanced Tutorial 2: Define your own healthcare task. …

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pyhealth.metrics.multilabel

WEBComputes metrics for multilabel classification. User can specify which metrics to compute by passing a list of metric names. The accepted metric names are: cwECE: classwise …

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pyhealth.datasets.TUABDataset

WEBDataset is available at https://isip.piconepress.com/projects/tuh_eeg/html/downloads.shtml The TUAB dataset (or Temple University Hospital EEG Abnormal Corpus) is a

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pyhealth.datasets.TUEVDataset

WEBDataset is available at https://isip.piconepress.com/projects/tuh_eeg/html/downloads.shtml This corpus is a subset of TUEG that contains annotations of EEG segments

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pyhealth.datasets.sample_dataset

WEBclass SampleBaseDataset (Dataset): """Sample base dataset class. This class the takes a list of samples as input (either from `BaseDataset.set_task()` or user-provided input), …

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pyhealth.datasets.SHHSDataset

WEBpyhealth.datasets.SHHSDataset#. The open Sleep-EDF Database Expanded database, refer to doc for more information.. class pyhealth.datasets. SHHSDataset (root, …

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pyhealth.datasets.mimic4

WEBclass MIMIC4Dataset (BaseEHRDataset): """Base dataset for MIMIC-IV dataset. The MIMIC-IV dataset is a large dataset of de-identified health records of ICU patients

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pyhealth.metrics.binary

WEBpyhealth.metrics.binary# pyhealth.metrics.binary. binary_metrics_fn (y_true, y_prob, metrics = None, threshold = 0.5) [source] # Computes metrics for binary classification. User can …

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pyhealth.metrics.binary

WEBCheck :func:`pyhealth.metrics.calibration.ece_confidence_binary`. If no metrics are specified, pr_auc, roc_auc and f1 are computed by default. This function calls …

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